{"id":1523,"date":"2013-04-06T17:35:00","date_gmt":"2013-04-06T20:35:00","guid":{"rendered":"http:\/\/steffenh3.sg-host.com\/?p=1523"},"modified":"2021-11-24T12:08:23","modified_gmt":"2021-11-24T12:08:23","slug":"the-microbial-world-through-different-eyes","status":"publish","type":"post","link":"https:\/\/scian.cl\/scientific-image-analysis\/the-microbial-world-through-different-eyes\/","title":{"rendered":"The Microbial World Through Different Eyes"},"content":{"rendered":"\n<p>Posgraduate Theoretical and Practical Course 02-12.04.2013 Montevideo, Uruguay<\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><img loading=\"lazy\" decoding=\"async\" width=\"550\" height=\"226\" src=\"https:\/\/scian.cl\/scientific-image-analysis\/wp-content\/uploads\/2021\/10\/2013_MicrobialWorld-1.png\" alt=\"\" class=\"wp-image-1524\" srcset=\"https:\/\/scian.cl\/scientific-image-analysis\/wp-content\/uploads\/2021\/10\/2013_MicrobialWorld-1.png 550w, https:\/\/scian.cl\/scientific-image-analysis\/wp-content\/uploads\/2021\/10\/2013_MicrobialWorld-1-300x123.png 300w\" sizes=\"auto, (max-width: 550px) 100vw, 550px\" \/><\/figure>\n\n\n<style>.wp-block-kadence-advancedheading.kt-adv-heading_94d976-f6, .wp-block-kadence-advancedheading.kt-adv-heading_94d976-f6[data-kb-block=\"kb-adv-heading_94d976-f6\"]{font-style:normal;}.wp-block-kadence-advancedheading.kt-adv-heading_94d976-f6 mark.kt-highlight, .wp-block-kadence-advancedheading.kt-adv-heading_94d976-f6[data-kb-block=\"kb-adv-heading_94d976-f6\"] mark.kt-highlight{font-style:normal;color:#f76a0c;-webkit-box-decoration-break:clone;box-decoration-break:clone;padding-top:0px;padding-right:0px;padding-bottom:0px;padding-left:0px;}.wp-block-kadence-advancedheading.kt-adv-heading_94d976-f6 img.kb-inline-image, .wp-block-kadence-advancedheading.kt-adv-heading_94d976-f6[data-kb-block=\"kb-adv-heading_94d976-f6\"] img.kb-inline-image{width:150px;vertical-align:baseline;}<\/style>\n<h2 class=\"kt-adv-heading_94d976-f6 wp-block-kadence-advancedheading\" data-kb-block=\"kb-adv-heading_94d976-f6\">Organization<\/h2>\n\n\n\n<p>Claudia Piccini, Instituto de Investigaciones Biol\u00f3gicas Clemente Estable<br>Paola Scavone, Instituto de Investigaciones Biol\u00f3gicas Clemente Estable<br>Federico Battistoni, Instituto de Investigaciones Biol\u00f3gicas Clemente Estable<\/p>\n\n\n<style>.wp-block-kadence-advancedheading.kt-adv-heading_d313d8-49, .wp-block-kadence-advancedheading.kt-adv-heading_d313d8-49[data-kb-block=\"kb-adv-heading_d313d8-49\"]{font-style:normal;}.wp-block-kadence-advancedheading.kt-adv-heading_d313d8-49 mark.kt-highlight, .wp-block-kadence-advancedheading.kt-adv-heading_d313d8-49[data-kb-block=\"kb-adv-heading_d313d8-49\"] mark.kt-highlight{font-style:normal;color:#f76a0c;-webkit-box-decoration-break:clone;box-decoration-break:clone;padding-top:0px;padding-right:0px;padding-bottom:0px;padding-left:0px;}.wp-block-kadence-advancedheading.kt-adv-heading_d313d8-49 img.kb-inline-image, .wp-block-kadence-advancedheading.kt-adv-heading_d313d8-49[data-kb-block=\"kb-adv-heading_d313d8-49\"] img.kb-inline-image{width:150px;vertical-align:baseline;}<\/style>\n<h2 class=\"kt-adv-heading_d313d8-49 wp-block-kadence-advancedheading\" data-kb-block=\"kb-adv-heading_d313d8-49\">Location<\/h2>\n\n\n\n<p><a href=\"http:\/\/www.iibce.edu.uy\/\" target=\"_blank\" rel=\"noreferrer noopener\">Instituto de Investigaciones Biol\u00f3gicas Clemente Estable (IIBCE).<br>Avenida Italia 3318. CP 11600. Montevideo &#8211; Uruguay.<\/a><\/p>\n\n\n<style>.wp-block-kadence-advancedheading.kt-adv-heading_f51ef9-44, .wp-block-kadence-advancedheading.kt-adv-heading_f51ef9-44[data-kb-block=\"kb-adv-heading_f51ef9-44\"]{font-style:normal;}.wp-block-kadence-advancedheading.kt-adv-heading_f51ef9-44 mark.kt-highlight, .wp-block-kadence-advancedheading.kt-adv-heading_f51ef9-44[data-kb-block=\"kb-adv-heading_f51ef9-44\"] mark.kt-highlight{font-style:normal;color:#f76a0c;-webkit-box-decoration-break:clone;box-decoration-break:clone;padding-top:0px;padding-right:0px;padding-bottom:0px;padding-left:0px;}.wp-block-kadence-advancedheading.kt-adv-heading_f51ef9-44 img.kb-inline-image, .wp-block-kadence-advancedheading.kt-adv-heading_f51ef9-44[data-kb-block=\"kb-adv-heading_f51ef9-44\"] img.kb-inline-image{width:150px;vertical-align:baseline;}<\/style>\n<h2 class=\"kt-adv-heading_f51ef9-44 wp-block-kadence-advancedheading\" data-kb-block=\"kb-adv-heading_f51ef9-44\">Teachers<\/h2>\n\n\n\n<ul class=\"wp-block-list\"><li>Fabio Olivares &#8211; (Brazil)<\/li><li>Gilberto Weissmuller &#8211; (Brazil)<\/li><li>Euan James &#8211; (UK)<\/li><li>Silvia Villar &#8211; (Uruguay)<\/li><li>Steffen H\u00e4rtel &#8211; (UChile, Chile)<\/li><li>Jorge Jara &#8211; (UChile, Chile)<\/li><li>Mauricio Cerda &#8211; (UChile, Chile)<\/li><\/ul>\n\n\n<style>.wp-block-kadence-advancedheading.kt-adv-heading_1f7848-23, .wp-block-kadence-advancedheading.kt-adv-heading_1f7848-23[data-kb-block=\"kb-adv-heading_1f7848-23\"]{font-style:normal;}.wp-block-kadence-advancedheading.kt-adv-heading_1f7848-23 mark.kt-highlight, .wp-block-kadence-advancedheading.kt-adv-heading_1f7848-23[data-kb-block=\"kb-adv-heading_1f7848-23\"] mark.kt-highlight{font-style:normal;color:#f76a0c;-webkit-box-decoration-break:clone;box-decoration-break:clone;padding-top:0px;padding-right:0px;padding-bottom:0px;padding-left:0px;}.wp-block-kadence-advancedheading.kt-adv-heading_1f7848-23 img.kb-inline-image, .wp-block-kadence-advancedheading.kt-adv-heading_1f7848-23[data-kb-block=\"kb-adv-heading_1f7848-23\"] img.kb-inline-image{width:150px;vertical-align:baseline;}<\/style>\n<h2 class=\"kt-adv-heading_1f7848-23 wp-block-kadence-advancedheading\" data-kb-block=\"kb-adv-heading_1f7848-23\">Poster<\/h2>\n\n\n\n<p>Download poster  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2013_MICROBIAL-WORLD-THROUGH-DIFFERENT-EYES.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a><\/p>\n\n\n<style>.wp-block-kadence-advancedheading.kt-adv-heading_9fa911-54, .wp-block-kadence-advancedheading.kt-adv-heading_9fa911-54[data-kb-block=\"kb-adv-heading_9fa911-54\"]{font-style:normal;}.wp-block-kadence-advancedheading.kt-adv-heading_9fa911-54 mark.kt-highlight, .wp-block-kadence-advancedheading.kt-adv-heading_9fa911-54[data-kb-block=\"kb-adv-heading_9fa911-54\"] mark.kt-highlight{font-style:normal;color:#f76a0c;-webkit-box-decoration-break:clone;box-decoration-break:clone;padding-top:0px;padding-right:0px;padding-bottom:0px;padding-left:0px;}.wp-block-kadence-advancedheading.kt-adv-heading_9fa911-54 img.kb-inline-image, .wp-block-kadence-advancedheading.kt-adv-heading_9fa911-54[data-kb-block=\"kb-adv-heading_9fa911-54\"] img.kb-inline-image{width:150px;vertical-align:baseline;}<\/style>\n<h2 class=\"kt-adv-heading_9fa911-54 wp-block-kadence-advancedheading\" data-kb-block=\"kb-adv-heading_9fa911-54\">Literature<\/h2>\n\n\n\n<p><strong>Optical Microscopy &amp; Image Processing:<\/strong> <br>Superresolution imaging for neuroscience.  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/1-Superresolution-imaging-for-neuroscience-1.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <br>Fast and robust optical flow for time-lapse microscopy using super-voxels.  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2-Fast-and-Robust-optical-flow-for-time-lapse-microscopy-using-super-voxels.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <br>Cell-based quantification of molecular biomarkers in histopathology specimens.  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/3-Cell-based-quantification-of-molecular-biomarkers-in-histopathology-specimens.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <br>Algorithms for cytoplasm segmentation of fluorescence labelled cells.  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/4-Algorithms-for-cytoplasm-segmentation-of-fluorescence-labelled-cells.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <br>Development of 3D Architecture of Uropathogenic Proteus mirabilis Batch Culture Biofilms &#8211; A Quantitative Confocal Microscopy Approach.  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/5-Development-of-3D-architecture-of-uropathogenic-Proteus-mirabilis-1-1.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <\/p>\n\n\n<style>.wp-block-kadence-advancedheading.kt-adv-heading_04b1e5-ab, .wp-block-kadence-advancedheading.kt-adv-heading_04b1e5-ab[data-kb-block=\"kb-adv-heading_04b1e5-ab\"]{font-style:normal;}.wp-block-kadence-advancedheading.kt-adv-heading_04b1e5-ab mark.kt-highlight, .wp-block-kadence-advancedheading.kt-adv-heading_04b1e5-ab[data-kb-block=\"kb-adv-heading_04b1e5-ab\"] mark.kt-highlight{font-style:normal;color:#f76a0c;-webkit-box-decoration-break:clone;box-decoration-break:clone;padding-top:0px;padding-right:0px;padding-bottom:0px;padding-left:0px;}.wp-block-kadence-advancedheading.kt-adv-heading_04b1e5-ab img.kb-inline-image, .wp-block-kadence-advancedheading.kt-adv-heading_04b1e5-ab[data-kb-block=\"kb-adv-heading_04b1e5-ab\"] img.kb-inline-image{width:150px;vertical-align:baseline;}<\/style>\n<h2 class=\"kt-adv-heading_04b1e5-ab wp-block-kadence-advancedheading\" data-kb-block=\"kb-adv-heading_04b1e5-ab\">Manuals &amp; More<\/h2>\n\n\n\n<p>ZEISS Principles of Confocal Microscopy  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/ZEISS_PrinciplesLSM.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <\/p>\n\n\n\n<p>Principles of Fluorescence Spectroscopy  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2006_PrinciplesOfFluorescenceSpectroscopy_Springer_Lakowicz.pdf\">PDF<\/a><a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2006_PrinciplesOfFluorescenceSpectroscopy_Springer_Lakowicz.pdf\" target=\"_blank\" rel=\"noreferrer noopener\"> <\/a><a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2006_PrinciplesOfFluorescenceSpectroscopy_Springer_Lakowicz.pdf\">Document<\/a> <\/p>\n\n\n\n<p>LEICE TCS LSI Brochure  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/Leica-TCS-LSI.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <\/p>\n\n\n\n<p>Huygens Professional User Guide from SVI:  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2018\/09\/SVI_proUsrGuide.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a>   <a href=\"http:\/\/www.svi.nl\/tiki-index.php\" target=\"_blank\" rel=\"noreferrer noopener\">Web Site<\/a> <\/p>\n\n\n\n<p>Intracellular Fluorescent Probe Concentrations by Confocal Microscopy, Finck et al. 1998  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2018\/09\/1998_Fink.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <\/p>\n\n\n\n<p>Seeing is believing? Alison J. North, The Journal of Cell Biology, Vol. 172, No. 1, January 2, 2006 9\ufffd18  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2006_NorthImaging.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <\/p>\n\n\n\n<p>The Good, the Bad and the Ugly ! Helen Pearson, NATURE, 447, May 2007  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2007_PearsonImaging.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <\/p>\n\n\n\n<p>Measuring and interpreting point spread functions to determine confocal microscope resolution and ensure quality control, Cole et al 2011, NATURE PROTOCOL  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2011_ColeetalNatureProtocols.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <\/p>\n\n\n\n<p>IDL\/ScianTimeCalc: 1er Manual de Reconstruci\u00f3n 3D  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/ManualIDL-4.doc\" target=\"_blank\" rel=\"noreferrer noopener\">Word Document<\/a> <\/p>\n\n\n<style>.wp-block-kadence-advancedheading.kt-adv-heading_b320c6-a7, .wp-block-kadence-advancedheading.kt-adv-heading_b320c6-a7[data-kb-block=\"kb-adv-heading_b320c6-a7\"]{font-style:normal;}.wp-block-kadence-advancedheading.kt-adv-heading_b320c6-a7 mark.kt-highlight, .wp-block-kadence-advancedheading.kt-adv-heading_b320c6-a7[data-kb-block=\"kb-adv-heading_b320c6-a7\"] mark.kt-highlight{font-style:normal;color:#f76a0c;-webkit-box-decoration-break:clone;box-decoration-break:clone;padding-top:0px;padding-right:0px;padding-bottom:0px;padding-left:0px;}.wp-block-kadence-advancedheading.kt-adv-heading_b320c6-a7 img.kb-inline-image, .wp-block-kadence-advancedheading.kt-adv-heading_b320c6-a7[data-kb-block=\"kb-adv-heading_b320c6-a7\"] img.kb-inline-image{width:150px;vertical-align:baseline;}<\/style>\n<h2 class=\"kt-adv-heading_b320c6-a7 wp-block-kadence-advancedheading\" data-kb-block=\"kb-adv-heading_b320c6-a7\">Lectures<\/h2>\n\n\n\n<p>Class 1: S H\u00e4rtel:  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2013_Microbial_World_Montevideo_Shartel_1_1h30m.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <br>&#8220;Introduction to Fluorescence Microscopy Resolution, Point Spread Function, Deconvolution, Pitfalls, and Perspectives &#8220;<\/p>\n\n\n\n<p>Class 2: J Jara:  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2013_Microbial_World_Montevideo_JJara_1_1h30m.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <br>&#8220;Digital Image Processing &#8220;<\/p>\n\n\n\n<p>Class 3: M Cerda:  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2013_Microbial_World_Montevideo_Mcerda_1_1h30m.pdf.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <br>&#8220;Image Analysis: Shape &amp; Structure &#8220;<\/p>\n\n\n\n<p>Class 4: M Cerda:  <a href=\"http:\/\/steffenh3.sg-host.com\/wp-content\/uploads\/2021\/10\/2013_Microbial_World_Montevideo_Mcerda_2_1h30m.pdf.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDF Document<\/a> <br>&#8220;Image Analysis: Dynamics &#8220;<\/p>\n\n\n<style>.wp-block-kadence-advancedheading.kt-adv-heading_706857-35, .wp-block-kadence-advancedheading.kt-adv-heading_706857-35[data-kb-block=\"kb-adv-heading_706857-35\"]{font-style:normal;}.wp-block-kadence-advancedheading.kt-adv-heading_706857-35 mark.kt-highlight, .wp-block-kadence-advancedheading.kt-adv-heading_706857-35[data-kb-block=\"kb-adv-heading_706857-35\"] mark.kt-highlight{font-style:normal;color:#f76a0c;-webkit-box-decoration-break:clone;box-decoration-break:clone;padding-top:0px;padding-right:0px;padding-bottom:0px;padding-left:0px;}.wp-block-kadence-advancedheading.kt-adv-heading_706857-35 img.kb-inline-image, .wp-block-kadence-advancedheading.kt-adv-heading_706857-35[data-kb-block=\"kb-adv-heading_706857-35\"] img.kb-inline-image{width:150px;vertical-align:baseline;}<\/style>\n<h2 class=\"kt-adv-heading_706857-35 wp-block-kadence-advancedheading\" data-kb-block=\"kb-adv-heading_706857-35\">Practical work<\/h2>\n\n\n\n<p>Practico 1<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Posgraduate Theoretical and Practical Course 02-12.04.2013 Montevideo, Uruguay Organization Claudia Piccini, Instituto de Investigaciones Biol\u00f3gicas Clemente EstablePaola Scavone, Instituto de Investigaciones Biol\u00f3gicas Clemente EstableFederico Battistoni, Instituto de Investigaciones Biol\u00f3gicas Clemente Estable Location Instituto de Investigaciones&#8230;<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_kadence_starter_templates_imported_post":false,"_kad_post_transparent":"","_kad_post_title":"","_kad_post_layout":"","_kad_post_sidebar_id":"","_kad_post_content_style":"","_kad_post_vertical_padding":"","_kad_post_feature":"","_kad_post_feature_position":"","_kad_post_header":false,"_kad_post_footer":false,"_kad_post_classname":"","footnotes":""},"categories":[2,3,48],"tags":[],"class_list":["post-1523","post","type-post","status-publish","format-standard","hentry","category-courses","category-courses-2-2018","category-international-courses-2013"],"_links":{"self":[{"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/posts\/1523","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/comments?post=1523"}],"version-history":[{"count":1,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/posts\/1523\/revisions"}],"predecessor-version":[{"id":2096,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/posts\/1523\/revisions\/2096"}],"wp:attachment":[{"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/media?parent=1523"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/categories?post=1523"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/tags?post=1523"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}