{"id":2395,"date":"2018-10-06T20:31:00","date_gmt":"2018-10-06T20:31:00","guid":{"rendered":"https:\/\/scian.cl\/scientific-image-analysis\/?p=2395"},"modified":"2023-06-03T16:05:44","modified_gmt":"2023-06-03T16:05:44","slug":"a-high-speed-tracking-algorithm-for-dense-granular-media","status":"publish","type":"post","link":"https:\/\/scian.cl\/scientific-image-analysis\/a-high-speed-tracking-algorithm-for-dense-granular-media\/","title":{"rendered":"A high-speed tracking algorithm for dense granular media"},"content":{"rendered":"\n<p>Computer Physics Communications<\/p>\n\n\n\n<p>Cerda M, Navaro CA, Silva J, Waitukaitis SR, Mujica N, Hitschfeld N.<\/p>\n\n\n\n<p><strong>ABSTRACT<\/strong><br>Many fields of study, including medical imaging, granular physics, colloidal physics, and active matter, require the precise identification and tracking of particle-like objects in images. While many algorithms exist to track particles in diffuse conditions, these often perform poorly when particles are densely packed together\u2014as in, for example, solid-like systems of granular materials. Incorrect particle identification can have significant effects on the calculation of physical quantities, which makes the development of more precise and faster tracking algorithms a worthwhile endeavor. In this work, we present a new tracking algorithm to identify particles in dense systems that is both highly accurate and fast. We demonstrate the efficacy of our approach by analyzing images of dense, solid-state granular media, where we achieve an identification error of 5% in the worst evaluated cases. Going further, we propose a parallelization strategy for our algorithm using a GPU, which results in a speedup of up to 10x when compared to a sequential CPU implementation in C and up to 40x when compared to the reference MATLAB library widely used for particle tracking. Our results extend the capabilities of state-of-the-art particle tracking methods by allowing fast, high-fidelity detection in dense media at high resolutions.<\/p>\n\n\n\n<p>LINK:<br><a rel=\"noreferrer noopener\" href=\"https:\/\/doi.org\/10.1016\/j.cpc.2018.02.010\" target=\"_blank\">https:\/\/doi.org\/10.1016\/j.cpc.2018.02.010<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Cerda, M., Navarro, C. A., Silva, J., Waitukaitis, S. R., Mujica, N., &#038; Hitschfeld, N. (2018). A high-speed tracking algorithm for dense granular media. Computer Physics Communications, 227, 8-16.<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_kadence_starter_templates_imported_post":false,"_kad_post_transparent":"","_kad_post_title":"","_kad_post_layout":"","_kad_post_sidebar_id":"","_kad_post_content_style":"","_kad_post_vertical_padding":"","_kad_post_feature":"","_kad_post_feature_position":"","_kad_post_header":false,"_kad_post_footer":false,"_kad_post_classname":"","footnotes":""},"categories":[24],"tags":[],"class_list":["post-2395","post","type-post","status-publish","format-standard","hentry","category-publications-2018"],"_links":{"self":[{"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/posts\/2395","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/comments?post=2395"}],"version-history":[{"count":4,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/posts\/2395\/revisions"}],"predecessor-version":[{"id":4052,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/posts\/2395\/revisions\/4052"}],"wp:attachment":[{"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/media?parent=2395"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/categories?post=2395"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/scian.cl\/scientific-image-analysis\/wp-json\/wp\/v2\/tags?post=2395"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}